QUERY OUR DATABASES

 This is a portal for the interrogation of our published raw and assembled sequence data.

 Sequence data is available for the following publications:

Elucidating the transcriptome of Fasciola hepatica - a key to fundamental and biotechnological discoveries for a neglected parasite.
Young ND, Hall RS, Jex AR, Cantacessi C, Gasser RB
Biotechnol Adv. 2010 Mar-Apr; 28(2):222-31.

Abstract available through pubmed: http://www.ncbi.nlm.nih.gov/pubmed/20006979

Differences in transcription between free-living and CO2-activated third-stage larvae of Haemonchus contortus

Cantacessi C, Campbell BE, Young ND, Jex AR, Hall RS, Presidente PJ, Zawadzki JL, Zhong W, Aleman B, Loukas A, Sternberg PW, Gasser RB
BMC Genomics. 2010 Apr 27; 11:266

Abstract available through pubmed: http://www.ncbi.nlm.nih.gov/pubmed/20420710

Massively parallel sequencing and analysis of the Necator americanus transcriptome

Cantacessi C, Mitreva M, Jex AR, Young ND, Campbell BE, Hall RS, Doyle MA, Ralph SA, Rabelo EM, Ranganathan S, Sternberg PW, Loukas A, Gasser RB
PLoS Negl Trop Dis. 2010 May 11; 4(5):e684

Abstract available through pubmed: http://www.ncbi.nlm.nih.gov/pubmed/20485481

 

Unlocking the transcriptomes of two carcinogenic parasites, Clonorchis sinensis and Opisthorchis viverrini

Young ND, Campbell BE, Hall RS, Jex AR, Cantacessi C, Laha T, Sohn WM, Sripa B, Loukas A, Brindley PJ, Gasser RB
PLoS Negl Trop Dis. 2010; 4(6):e719.

 Abstract available through pubmed: http://www.ncbi.nlm.nih.gov/pubmed/20582164

A practical, bioinformatic workflow system for large datasets generated by next-generation sequencing

Cantacessi C, Jex AR, Hall RS, Young ND, Campbell BE, Joachim A, Nolan MJ, Abubucker S, Sternberg PW, Ranganathan S, Mitreva M, Gasser RB, Nucleic Acid Res. 2010; 38(17):e171.

 Abstract available through pubmed: http://www.ncbi.nlm.nih.gov/pubmed/20682560

 

First transcriptomic analysis of the economically important parasitic nematode, Trichostrongylus colubriformis, using a next-generation sequencing approach

Cantacessi C, Mitreva M, Campbell BE, Hall RS, Young ND, Jex AR, Ranganathan S, Gasser RB, Infect Genet Evol. 2010; 10(8):1199-1207

Abstract available through pubmed: http://www.ncbi.nlm.nih.gov/pubmed/20692378

 

A portrait of the transcriptome of the neglected trematode, Fasciola gigantica - biological and biotechnological implications.

Young ND, Jex AR, Cantacessi C, Hall RS, Campbell BE, Spithill TW, Tangkawattana S, Tangkawattana P, Laha T, Gasser RB:, PLoS Negl Trop Dis. 2011; 5(2):e1004.

Abstract available through pubmed: http://www.ncbi.nlm.nih.gov/pubmed/21408104

 

Insights into SCP/TAPS proteins of liver flukes based on large-scale bioinformatic analyses of sequence datasets.
 
Cantacessi C, Hofmann A, Young ND, Broder U, Hall RS, Loukas A, Gasser RB, PLoS One. 2012 in press.
 

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